Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clcn1Q64347 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Clcn1Q64347 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Clcn1Q64347 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.39□□□□□ -0.11
Clcn1Q64347 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Clcn1Q64347 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clcn1Q64347 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcn1Q64347 Erich3-203ENSMUST00000189969 3460 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm15074-201ENSMUST00000117603 936 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm15620-201ENSMUST00000122949 270 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm25343-201ENSMUST00000157460 107 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm9162-201ENSMUST00000182081 991 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.38□□□□□ -0.11
Clcn1Q64347 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm42599-201ENSMUST00000201308 469 ntBASIC14.38□□□□□ -0.11
Clcn1Q64347 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn1Q64347 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcn1Q64347 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clcn1Q64347 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Gm37293-201ENSMUST00000191658 295 ntBASIC14.37□□□□□ -0.11
Clcn1Q64347 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clcn1Q64347 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clcn1Q64347 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn1Q64347 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Mir453-201ENSMUST00000104732 82 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms