Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm2021-201ENSMUST00000190623 464 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm8615-201ENSMUST00000025307 771 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm24146-201ENSMUST00000082760 321 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm14108-201ENSMUST00000122234 494 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm24346-201ENSMUST00000158712 194 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm43833-201ENSMUST00000198828 293 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm16410-201ENSMUST00000094550 774 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.77□□□□□ -0.68
Col12a1Q60847 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col12a1Q60847 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col12a1Q60847 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col12a1Q60847 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm14676-201ENSMUST00000117722 858 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm12424-201ENSMUST00000179673 447 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm17764-201ENSMUST00000185925 391 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 CT025547.1-201ENSMUST00000225127 578 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm19090-201ENSMUST00000218187 774 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm18119-201ENSMUST00000219972 616 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col12a1Q60847 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.77□□□□□ -0.69
Col12a1Q60847 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Col12a1Q60847 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm12397-201ENSMUST00000117674 615 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm6317-201ENSMUST00000183159 1000 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm44008-201ENSMUST00000204345 412 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Gm11231-201ENSMUST00000117895 1706 ntBASIC10.76□□□□□ -0.69
Col12a1Q60847 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col12a1Q60847 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms