Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm11509-201ENSMUST00000117358 325 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Mir7677-201ENSMUST00000184226 67 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm7399-201ENSMUST00000032395 858 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.74□□□□□ -0.69
Nr1h4Q60641 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.74□□□□□ -0.69
Nr1h4Q60641 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm13665-201ENSMUST00000120830 528 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm22846-201ENSMUST00000157706 270 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm20495-201ENSMUST00000173902 235 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm29615-201ENSMUST00000185371 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28224-201ENSMUST00000186078 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm29001-201ENSMUST00000186177 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28292-201ENSMUST00000186593 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28101-201ENSMUST00000187608 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm29076-201ENSMUST00000187689 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28302-201ENSMUST00000187931 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28646-201ENSMUST00000188220 697 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms