Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm23153-201ENSMUST00000175323 313 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm42518-201ENSMUST00000196277 938 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm25063-201ENSMUST00000104666 94 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm10169-201ENSMUST00000121822 348 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm25072-201ENSMUST00000175233 235 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm45219-201ENSMUST00000205602 465 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm7600-201ENSMUST00000209657 785 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm25580-201ENSMUST00000083409 327 ntBASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps54Q5SPW0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms