Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm10774-201ENSMUST00000188689 204 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm37835-201ENSMUST00000193305 361 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ginm1-202ENSMUST00000065124 300 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm8111-201ENSMUST00000117659 987 ntBASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm4909-201ENSMUST00000118749 794 ntBASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm18367-201ENSMUST00000176139 600 ntBASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm2517-201ENSMUST00000215651 348 ntBASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav5d-4Q5R1F6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms