Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Gm38111-201ENSMUST00000194817 2741 ntBASIC13.24□□□□□ -0.29
Col5a2Q3U962 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.24□□□□□ -0.29
Col5a2Q3U962 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.24□□□□□ -0.29
Col5a2Q3U962 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm13505-201ENSMUST00000121666 817 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm26943-201ENSMUST00000182295 957 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm11919-201ENSMUST00000117609 721 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a2Q3U962 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gm38103-201ENSMUST00000191707 864 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gm8162-201ENSMUST00000213951 665 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gm22341-201ENSMUST00000083775 129 ntBASIC13.22□□□□□ -0.29
Col5a2Q3U962 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms