Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm14592-201ENSMUST00000117201 560 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm17040-202ENSMUST00000170597 889 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm19246-201ENSMUST00000173599 255 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm29067-201ENSMUST00000190821 470 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm44506-201ENSMUST00000206278 965 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cul4aQ3TCH7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm7851-201ENSMUST00000117574 323 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm15566-201ENSMUST00000121130 590 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm38321-201ENSMUST00000195053 235 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 AU022133-201ENSMUST00000200601 873 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cul4aQ3TCH7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cul4aQ3TCH7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms