Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Gm43052-201ENSMUST00000201451 1628 ntBASIC14.14□□□□□ -0.15
Znf541Q0GGX2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Gm42449-201ENSMUST00000200349 2258 ntBASIC14.14□□□□□ -0.15
Znf541Q0GGX2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm23218-201ENSMUST00000158124 276 ntBASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm36987-201ENSMUST00000194704 2979 ntBASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm18463-201ENSMUST00000207258 474 ntBASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm18460-201ENSMUST00000208088 464 ntBASIC14.13□□□□□ -0.15
Znf541Q0GGX2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Znf541Q0GGX2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm15196-201ENSMUST00000121406 482 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm18733-202ENSMUST00000174447 401 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm23647-201ENSMUST00000175042 109 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Rn5s-201ENSMUST00000177555 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm22109-201ENSMUST00000177995 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm22291-201ENSMUST00000178027 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm23284-201ENSMUST00000178069 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm25018-201ENSMUST00000179081 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm25212-201ENSMUST00000179432 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm26391-201ENSMUST00000179843 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm7985-201ENSMUST00000183329 981 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm42430-201ENSMUST00000197209 616 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gm24089-201ENSMUST00000093696 109 ntBASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Znf541Q0GGX2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms