Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pfdn6Q03958 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm14193-201ENSMUST00000105067 153 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm42867-201ENSMUST00000202995 469 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm7848-201ENSMUST00000210739 718 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.33□□□□□ -0.6
Pfdn6Q03958 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pfdn6Q03958 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm15236-201ENSMUST00000117309 379 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm27530-201ENSMUST00000184096 98 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm5996-201ENSMUST00000211110 718 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.32□□□□□ -0.6
Pfdn6Q03958 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn6Q03958 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms