Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GabpaQ00422 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GabpaQ00422 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Gm16165-201ENSMUST00000160140 795 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Gm5700-201ENSMUST00000191483 989 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Gm45500-201ENSMUST00000211676 803 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GabpaQ00422 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Gm7589-201ENSMUST00000085631 534 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GabpaQ00422 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.75□□□□□ -0.37
GabpaQ00422 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GabpaQ00422 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GabpaQ00422 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.74□□□□□ -0.37
GabpaQ00422 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm24328-201ENSMUST00000175104 67 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm19927-201ENSMUST00000185792 781 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Gm34379-201ENSMUST00000195036 290 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Gm42430-201ENSMUST00000197209 616 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.74□□□□□ -0.37
GabpaQ00422 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
GabpaQ00422 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.74□□□□□ -0.37
GabpaQ00422 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.74□□□□□ -0.37
GabpaQ00422 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GabpaQ00422 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.73□□□□□ -0.37
GabpaQ00422 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GabpaQ00422 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GabpaQ00422 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GabpaQ00422 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GabpaQ00422 Gm11578-201ENSMUST00000118530 459 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 Gm12986-201ENSMUST00000119037 967 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 Gm14993-201ENSMUST00000121180 164 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GabpaQ00422 Gm5529-201ENSMUST00000165691 891 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GabpaQ00422 Gm17070-201ENSMUST00000170463 784 ntBASIC12.73□□□□□ -0.37
GabpaQ00422 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms