Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smn1P97801 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gm17420-201ENSMUST00000164753 153 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm25700-201ENSMUST00000177693 110 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm27516-201ENSMUST00000184237 98 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm43184-201ENSMUST00000197247 542 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Smn1P97801 Gm6722-201ENSMUST00000221586 390 ntBASIC9.62□□□□□ -0.87
Smn1P97801 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.62□□□□□ -0.87
Smn1P97801 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smn1P97801 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smn1P97801 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smn1P97801 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.62□□□□□ -0.87
Smn1P97801 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.62□□□□□ -0.87
Smn1P97801 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Smn1P97801 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.61□□□□□ -0.87
Smn1P97801 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.61□□□□□ -0.87
Smn1P97801 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.61□□□□□ -0.87
Smn1P97801 Gm21769-201ENSMUST00000211922 111 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Gm4978-201ENSMUST00000071565 801 ntBASIC9.61□□□□□ -0.87
Smn1P97801 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.61□□□□□ -0.87
Smn1P97801 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.61□□□□□ -0.87
Smn1P97801 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Smn1P97801 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smn1P97801 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms