Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm17877-201ENSMUST00000192578 814 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm34023-201ENSMUST00000195539 217 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm44329-201ENSMUST00000197469 112 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm23680-201ENSMUST00000083162 164 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.7□□□□□ -0.7
Nkx3-2P97503 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx3-2P97503 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Mir6998-201ENSMUST00000183343 64 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm28388-201ENSMUST00000186262 437 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm43058-201ENSMUST00000197645 625 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Rgr-203ENSMUST00000225070 4704 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.69□□□□□ -0.7
Nkx3-2P97503 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Nkx3-2P97503 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms