Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 CT009713.1-201ENSMUST00000224828 853 ntBASIC10.12□□□□□ -0.79
SgcbP82349 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Gm23105-201ENSMUST00000083719 134 ntBASIC10.12□□□□□ -0.79
SgcbP82349 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SgcbP82349 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SgcbP82349 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SgcbP82349 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
SgcbP82349 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
SgcbP82349 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SgcbP82349 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SgcbP82349 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.11□□□□□ -0.79
SgcbP82349 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SgcbP82349 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SgcbP82349 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Erich3-203ENSMUST00000189969 3460 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Gm23272-201ENSMUST00000104053 129 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm25076-201ENSMUST00000104098 132 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
SgcbP82349 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.11□□□□□ -0.79
SgcbP82349 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm37299-201ENSMUST00000193951 826 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm44387-201ENSMUST00000196298 145 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.11□□□□□ -0.79
SgcbP82349 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.11□□□□□ -0.79
SgcbP82349 Gm44126-201ENSMUST00000204831 514 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm44980-201ENSMUST00000205826 314 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Gm9463-201ENSMUST00000206707 601 ntBASIC10.11□□□□□ -0.79
SgcbP82349 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SgcbP82349 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SgcbP82349 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.11□□□□□ -0.79
SgcbP82349 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.11□□□□□ -0.79
SgcbP82349 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.11□□□□□ -0.79
SgcbP82349 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SgcbP82349 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcbP82349 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SgcbP82349 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.1□□□□□ -0.79
SgcbP82349 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SgcbP82349 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SgcbP82349 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SgcbP82349 Gm8111-201ENSMUST00000117659 987 ntBASIC10.1□□□□□ -0.79
SgcbP82349 Gm13740-201ENSMUST00000120590 310 ntBASIC10.1□□□□□ -0.79
SgcbP82349 Gm14460-201ENSMUST00000121511 639 ntBASIC10.1□□□□□ -0.79
SgcbP82349 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcbP82349 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms