Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
Usp9xP70398 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp9xP70398 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm25591-201ENSMUST00000177317 94 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm28671-201ENSMUST00000187036 692 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC9.32□□□□□ -0.92
Usp9xP70398 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usp9xP70398 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.32□□□□□ -0.92
Usp9xP70398 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Usp9xP70398 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.32□□□□□ -0.92
Usp9xP70398 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp9xP70398 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm16165-201ENSMUST00000160140 795 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm21631-201ENSMUST00000195041 754 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 BB187690-201ENSMUST00000198619 1176 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC9.31□□□□□ -0.92
Usp9xP70398 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Usp9xP70398 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Usp9xP70398 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.31□□□□□ -0.92
Usp9xP70398 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm6238-201ENSMUST00000120999 465 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Gm6038-201ENSMUST00000154310 948 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm29689-201ENSMUST00000221076 589 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Cacna2d3-208ENSMUST00000225985 918 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.31□□□□□ -0.92
Usp9xP70398 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp9xP70398 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp9xP70398 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms