Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm18734-201ENSMUST00000172937 808 ntBASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm6114-201ENSMUST00000182472 968 ntBASIC9.94□□□□□ -0.82
Sec61a1P61620 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.94□□□□□ -0.82
Sec61a1P61620 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.93□□□□□ -0.82
Sec61a1P61620 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm11331-201ENSMUST00000119764 288 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm20426-201ENSMUST00000173657 440 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm18038-201ENSMUST00000197900 485 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm7848-201ENSMUST00000210739 718 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm5369-201ENSMUST00000217499 588 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Nsd1-205ENSMUST00000224693 852 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.93□□□□□ -0.82
Sec61a1P61620 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sec61a1P61620 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sec61a1P61620 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms