Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdkn2bP55271 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm8731-201ENSMUST00000118088 412 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm13461-201ENSMUST00000120980 662 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.74□□□□□ -0.69
Cdkn2bP55271 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdkn2bP55271 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm4294-201ENSMUST00000105169 614 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm27441-201ENSMUST00000185000 105 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm9540-201ENSMUST00000188230 478 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm29499-201ENSMUST00000189151 486 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm28329-201ENSMUST00000191208 689 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm29171-201ENSMUST00000191397 486 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm32111-201ENSMUST00000207689 846 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gm6082-201ENSMUST00000215204 454 ntBASIC10.73□□□□□ -0.69
Cdkn2bP55271 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms