Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm19246-201ENSMUST00000173599 255 ntBASIC11.12□□□□□ -0.63
Pdx1P52946 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.12□□□□□ -0.63
Pdx1P52946 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.12□□□□□ -0.63
Pdx1P52946 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdx1P52946 Snora73b-201ENSMUST00000083419 205 ntBASIC11.12□□□□□ -0.63
Pdx1P52946 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.12□□□□□ -0.63
Pdx1P52946 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pdx1P52946 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm19459-201ENSMUST00000176240 835 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Gm5523-201ENSMUST00000180415 997 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm9463-201ENSMUST00000206707 601 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pdx1P52946 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.11□□□□□ -0.63
Pdx1P52946 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pdx1P52946 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.11□□□□□ -0.63
Pdx1P52946 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdx1P52946 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Pdx1P52946 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.1□□□□□ -0.63
Pdx1P52946 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pdx1P52946 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.1□□□□□ -0.63
Pdx1P52946 Gm22902-201ENSMUST00000158488 302 ntBASIC11.1□□□□□ -0.63
Pdx1P52946 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms