Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
SftpdP50404 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Mir1943-201ENSMUST00000158276 73 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.83□□□□□ -0.52
SftpdP50404 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm23771-201ENSMUST00000178702 110 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SftpdP50404 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SftpdP50404 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SftpdP50404 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.82□□□□□ -0.52
SftpdP50404 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.82□□□□□ -0.52
SftpdP50404 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Gm27910-201ENSMUST00000185004 107 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Gm37986-201ENSMUST00000193285 383 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Gm43947-201ENSMUST00000203019 959 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.82□□□□□ -0.52
SftpdP50404 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.82□□□□□ -0.52
SftpdP50404 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.82□□□□□ -0.52
SftpdP50404 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SftpdP50404 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpdP50404 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SftpdP50404 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SftpdP50404 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SftpdP50404 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.81□□□□□ -0.52
SftpdP50404 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
SftpdP50404 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SftpdP50404 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SftpdP50404 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SftpdP50404 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpdP50404 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.81□□□□□ -0.52
SftpdP50404 Gm9550-201ENSMUST00000161130 862 ntBASIC11.81□□□□□ -0.52
SftpdP50404 Mir3102-201ENSMUST00000175555 104 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms