Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.13□□□□□ -0.63
Sox18P43680 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox18P43680 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Sox18P43680 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Gm9673-201ENSMUST00000119287 781 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm11783-201ENSMUST00000119549 885 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm8215-201ENSMUST00000120627 990 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm11244-201ENSMUST00000121243 237 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Sox18P43680 Gm6918-201ENSMUST00000167622 1222 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Gm23400-201ENSMUST00000174994 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm26463-201ENSMUST00000175065 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm24332-201ENSMUST00000175102 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25959-201ENSMUST00000175112 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm22475-201ENSMUST00000175169 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm22903-201ENSMUST00000175193 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25070-201ENSMUST00000175237 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm24159-201ENSMUST00000175264 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25299-201ENSMUST00000175283 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm23798-201ENSMUST00000175560 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm23802-201ENSMUST00000175565 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25708-201ENSMUST00000177687 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm24370-201ENSMUST00000178007 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm23049-201ENSMUST00000178068 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm28019-201ENSMUST00000178138 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25571-201ENSMUST00000178322 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25355-201ENSMUST00000178456 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm24975-201ENSMUST00000178492 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm23189-201ENSMUST00000178954 102 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm25100-201ENSMUST00000179750 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm23064-201ENSMUST00000179866 101 ntBASIC11.12□□□□□ -0.63
Sox18P43680 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox18P43680 Gm19214-201ENSMUST00000191956 1083 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.12□□□□□ -0.63
Sox18P43680 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.12□□□□□ -0.63
Sox18P43680 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.12□□□□□ -0.63
Sox18P43680 AC115357.1-201ENSMUST00000227575 466 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Gm10263-201ENSMUST00000085163 300 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox18P43680 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sox18P43680 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox18P43680 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox18P43680 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.12□□□□□ -0.63
Sox18P43680 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox18P43680 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Gm8177-201ENSMUST00000181591 1336 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm11342-203ENSMUST00000224879 1324 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms