Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm37299-201ENSMUST00000193951 826 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Nsd1-205ENSMUST00000224693 852 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.3□□□□□ -0.76
Nkx2-2P42586 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-2P42586 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm14592-201ENSMUST00000117201 560 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm4917-201ENSMUST00000121452 650 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm44323-201ENSMUST00000198689 129 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm10020-201ENSMUST00000081993 612 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.29□□□□□ -0.76
Nkx2-2P42586 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-2P42586 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm11246-201ENSMUST00000120880 345 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms