Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rab5cP35278 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rab5cP35278 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rab5cP35278 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm13616-201ENSMUST00000120600 222 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.12□□□□□ -0.95
Rab5cP35278 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.12□□□□□ -0.95
Rab5cP35278 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Rab5cP35278 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rab5cP35278 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.12□□□□□ -0.95
Rab5cP35278 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rab5cP35278 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Rab5cP35278 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rab5cP35278 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm26308-201ENSMUST00000157768 69 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Gm24074-201ENSMUST00000158178 260 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Rab5cP35278 Gm38321-201ENSMUST00000195053 235 ntBASIC9.11□□□□□ -0.95
Rab5cP35278 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.11□□□□□ -0.95
Rab5cP35278 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rab5cP35278 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rab5cP35278 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rab5cP35278 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rab5cP35278 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms