Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vcam1P29533 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Mir671-201ENSMUST00000102432 98 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.9□□□□□ -0.34
Vcam1P29533 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23400-201ENSMUST00000174994 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm26463-201ENSMUST00000175065 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm24332-201ENSMUST00000175102 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25959-201ENSMUST00000175112 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm22475-201ENSMUST00000175169 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm22903-201ENSMUST00000175193 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25070-201ENSMUST00000175237 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm24159-201ENSMUST00000175264 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25299-201ENSMUST00000175283 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23798-201ENSMUST00000175560 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23802-201ENSMUST00000175565 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25708-201ENSMUST00000177687 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm24370-201ENSMUST00000178007 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23049-201ENSMUST00000178068 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm28019-201ENSMUST00000178138 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25571-201ENSMUST00000178322 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25355-201ENSMUST00000178456 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm24975-201ENSMUST00000178492 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23189-201ENSMUST00000178954 102 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm25100-201ENSMUST00000179750 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm23064-201ENSMUST00000179866 101 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.9□□□□□ -0.34
Vcam1P29533 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vcam1P29533 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.9□□□□□ -0.34
Vcam1P29533 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.9□□□□□ -0.34
Vcam1P29533 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.9□□□□□ -0.34
Vcam1P29533 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vcam1P29533 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcam1P29533 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm25545-201ENSMUST00000122673 323 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm18733-202ENSMUST00000174447 401 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.89□□□□□ -0.35
Vcam1P29533 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm33080-201ENSMUST00000205429 172 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.89□□□□□ -0.35
Vcam1P29533 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vcam1P29533 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.89□□□□□ -0.35
Vcam1P29533 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms