Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6bP23440 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm12990-201ENSMUST00000120372 468 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm22379-201ENSMUST00000157480 131 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.37□□□□□ -0.43
Pde6bP23440 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm43163-201ENSMUST00000196571 442 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Gm43380-201ENSMUST00000200421 220 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm35713-201ENSMUST00000210516 199 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6bP23440 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.37□□□□□ -0.43
Pde6bP23440 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.37□□□□□ -0.43
Pde6bP23440 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pde6bP23440 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6bP23440 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pde6bP23440 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pde6bP23440 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pde6bP23440 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6bP23440 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.36□□□□□ -0.43
Pde6bP23440 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Gm13022-201ENSMUST00000121181 285 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pde6bP23440 Gm17889-201ENSMUST00000198410 598 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Gm30671-201ENSMUST00000214898 318 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Gm18515-201ENSMUST00000219755 797 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Gm18065-201ENSMUST00000221395 526 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pde6bP23440 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Mir483-201ENSMUST00000093631 73 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.36□□□□□ -0.43
Pde6bP23440 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.36□□□□□ -0.43
Pde6bP23440 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6bP23440 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pde6bP23440 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm11500-201ENSMUST00000118237 601 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Gm11700-201ENSMUST00000119409 403 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Gm11980-201ENSMUST00000121445 986 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm25492-201ENSMUST00000157383 129 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms