Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.22□□□□□ -0.77
Cbx3P23198 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm12363-201ENSMUST00000122250 668 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.22□□□□□ -0.77
Cbx3P23198 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cbx3P23198 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm9136-201ENSMUST00000193368 454 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 Gm42693-201ENSMUST00000196779 631 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.22□□□□□ -0.77
Cbx3P23198 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.22□□□□□ -0.77
Cbx3P23198 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Cbx3P23198 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Erich3-203ENSMUST00000189969 3460 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.22□□□□□ -0.77
Cbx3P23198 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 AA474408-201ENSMUST00000098110 3339 ntBASIC10.22□□□□□ -0.77
Cbx3P23198 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.21□□□□□ -0.77
Cbx3P23198 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.21□□□□□ -0.77
Cbx3P23198 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.21□□□□□ -0.77
Cbx3P23198 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.21□□□□□ -0.77
Cbx3P23198 Gm26927-201ENSMUST00000182385 965 ntBASIC10.21□□□□□ -0.77
Cbx3P23198 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.21□□□□□ -0.77
Cbx3P23198 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cbx3P23198 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cbx3P23198 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cbx3P23198 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cbx3P23198 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Cbx3P23198 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.21□□□□□ -0.78
Cbx3P23198 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cbx3P23198 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms