Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.07□□□□□ -0.32
Col1a1P11087 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col1a1P11087 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.07□□□□□ -0.32
Col1a1P11087 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col1a1P11087 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col1a1P11087 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col1a1P11087 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col1a1P11087 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col1a1P11087 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col1a1P11087 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col1a1P11087 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col1a1P11087 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.06□□□□□ -0.32
Col1a1P11087 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.06□□□□□ -0.32
Col1a1P11087 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.06□□□□□ -0.32
Col1a1P11087 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm29304-201ENSMUST00000186555 695 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm29223-201ENSMUST00000188867 695 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm37921-201ENSMUST00000194333 695 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm17936-201ENSMUST00000199413 988 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.06□□□□□ -0.32
Col1a1P11087 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm5278-201ENSMUST00000055957 552 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Col1a1P11087 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Col1a1P11087 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.06□□□□□ -0.32
Col1a1P11087 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col1a1P11087 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Col1a1P11087 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm23132-201ENSMUST00000104254 132 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Gm13286-201ENSMUST00000117750 537 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm15258-201ENSMUST00000153801 741 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Gm4705-201ENSMUST00000177415 354 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm28671-201ENSMUST00000187036 692 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm6677-201ENSMUST00000195100 441 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC13.05□□□□□ -0.32
Col1a1P11087 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col1a1P11087 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col1a1P11087 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col1a1P11087 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.05□□□□□ -0.32
Col1a1P11087 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col1a1P11087 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col1a1P11087 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms