Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm9089-201ENSMUST00000122027 526 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Lect2-202ENSMUST00000225183 823 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp6P0C0A3 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm15881-201ENSMUST00000148792 942 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp6P0C0A3 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Gm6722-201ENSMUST00000221586 390 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.25□□□□□ -0.45
Chmp6P0C0A3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms