Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NclP09405 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.72■□□□□ 0.27
NclP09405 Gm9133-201ENSMUST00000118289 540 ntBASIC16.72■□□□□ 0.27
NclP09405 Gm13284-201ENSMUST00000121020 547 ntBASIC16.72■□□□□ 0.27
NclP09405 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC16.72■□□□□ 0.27
NclP09405 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC16.72■□□□□ 0.27
NclP09405 Gm24248-201ENSMUST00000157321 322 ntBASIC16.72■□□□□ 0.27
NclP09405 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NclP09405 AC238811.4-201ENSMUST00000178019 1246 ntBASIC16.72■□□□□ 0.27
NclP09405 AC238940.3-201ENSMUST00000178830 1246 ntBASIC16.72■□□□□ 0.27
NclP09405 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Gm26982-201ENSMUST00000182250 1151 ntBASIC16.72■□□□□ 0.27
NclP09405 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC16.72■□□□□ 0.27
NclP09405 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
NclP09405 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC16.72■□□□□ 0.27
NclP09405 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NclP09405 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NclP09405 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC16.72■□□□□ 0.27
NclP09405 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NclP09405 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NclP09405 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC16.71■□□□□ 0.27
NclP09405 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
NclP09405 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gm6322-201ENSMUST00000118789 1004 ntBASIC16.71■□□□□ 0.27
NclP09405 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.71■□□□□ 0.27
NclP09405 Gm16030-201ENSMUST00000159098 603 ntBASIC16.71■□□□□ 0.27
NclP09405 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC16.71■□□□□ 0.27
NclP09405 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 AC159002.1-201ENSMUST00000226714 924 ntBASIC16.71■□□□□ 0.27
NclP09405 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NclP09405 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NclP09405 Gm17230-201ENSMUST00000171194 3942 ntBASIC16.71■□□□□ 0.27
NclP09405 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NclP09405 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NclP09405 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NclP09405 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC16.7■□□□□ 0.26
NclP09405 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC16.7■□□□□ 0.26
NclP09405 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.7■□□□□ 0.26
NclP09405 Gm13351-201ENSMUST00000118087 414 ntBASIC16.7■□□□□ 0.26
NclP09405 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC16.7■□□□□ 0.26
NclP09405 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC16.7■□□□□ 0.26
NclP09405 Gm9369-201ENSMUST00000196009 733 ntBASIC16.7■□□□□ 0.26
NclP09405 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.7■□□□□ 0.26
NclP09405 Gm9353-201ENSMUST00000200472 604 ntBASIC16.7■□□□□ 0.26
NclP09405 AC154305.2-201ENSMUST00000225813 901 ntBASIC16.7■□□□□ 0.26
NclP09405 Gm10020-201ENSMUST00000081993 612 ntBASIC16.7■□□□□ 0.26
NclP09405 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NclP09405 Erich3-203ENSMUST00000189969 3460 ntBASIC16.7■□□□□ 0.26
NclP09405 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NclP09405 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NclP09405 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NclP09405 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NclP09405 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NclP09405 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC16.69■□□□□ 0.26
NclP09405 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms