Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.06□□□□□ -0.8
P06344 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.06□□□□□ -0.8
P06344 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.06□□□□□ -0.8
P06344 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P06344 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P06344 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.06□□□□□ -0.8
P06344 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P06344 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.05□□□□□ -0.8
P06344 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P06344 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
P06344 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.05□□□□□ -0.8
P06344 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P06344 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.05□□□□□ -0.8
P06344 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P06344 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.05□□□□□ -0.8
P06344 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.05□□□□□ -0.8
P06344 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.05□□□□□ -0.8
P06344 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.05□□□□□ -0.8
P06344 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.05□□□□□ -0.8
P06344 Mir1956-201ENSMUST00000157748 65 ntBASIC10.05□□□□□ -0.8
P06344 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm21778-201ENSMUST00000178779 471 ntBASIC10.05□□□□□ -0.8
P06344 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.05□□□□□ -0.8
P06344 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.05□□□□□ -0.8
P06344 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.05□□□□□ -0.8
P06344 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.05□□□□□ -0.8
P06344 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
P06344 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.05□□□□□ -0.8
P06344 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
P06344 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.05□□□□□ -0.8
P06344 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
P06344 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.05□□□□□ -0.8
P06344 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.05□□□□□ -0.8
P06344 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
P06344 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06344 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P06344 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.04□□□□□ -0.8
P06344 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
P06344 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.04□□□□□ -0.8
P06344 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P06344 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.04□□□□□ -0.8
P06344 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
P06344 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P06344 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P06344 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
P06344 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Gm13422-201ENSMUST00000118834 504 ntBASIC10.04□□□□□ -0.8
P06344 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.04□□□□□ -0.8
P06344 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06344 Gm24398-201ENSMUST00000157870 109 ntBASIC10.04□□□□□ -0.8
P06344 Olfml3-204ENSMUST00000169286 874 ntBASIC10.04□□□□□ -0.8
P06344 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.04□□□□□ -0.8
P06344 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.04□□□□□ -0.8
P06344 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms