Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
IghmP01872 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
IghmP01872 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
IghmP01872 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.52□□□□□ -0.73
IghmP01872 Gm12419-201ENSMUST00000116649 636 ntBASIC10.52□□□□□ -0.73
IghmP01872 Gm7857-201ENSMUST00000117957 358 ntBASIC10.52□□□□□ -0.73
IghmP01872 Mir1896-201ENSMUST00000122641 81 ntBASIC10.52□□□□□ -0.73
IghmP01872 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.52□□□□□ -0.73
IghmP01872 Gm24990-201ENSMUST00000157406 323 ntBASIC10.52□□□□□ -0.73
IghmP01872 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Gm43186-201ENSMUST00000198130 824 ntBASIC10.52□□□□□ -0.73
IghmP01872 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.52□□□□□ -0.73
IghmP01872 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.52□□□□□ -0.73
IghmP01872 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
IghmP01872 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.52□□□□□ -0.73
IghmP01872 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IghmP01872 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
IghmP01872 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.51□□□□□ -0.73
IghmP01872 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.51□□□□□ -0.73
IghmP01872 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.51□□□□□ -0.73
IghmP01872 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.51□□□□□ -0.73
IghmP01872 Gm37597-201ENSMUST00000191853 382 ntBASIC10.51□□□□□ -0.73
IghmP01872 Gm37246-201ENSMUST00000192665 835 ntBASIC10.51□□□□□ -0.73
IghmP01872 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
IghmP01872 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
IghmP01872 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
IghmP01872 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
IghmP01872 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.51□□□□□ -0.73
IghmP01872 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
IghmP01872 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
IghmP01872 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
IghmP01872 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm16219-201ENSMUST00000120096 274 ntBASIC10.5□□□□□ -0.73
IghmP01872 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.5□□□□□ -0.73
IghmP01872 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.5□□□□□ -0.73
IghmP01872 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.5□□□□□ -0.73
IghmP01872 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm24992-201ENSMUST00000157412 130 ntBASIC10.5□□□□□ -0.73
IghmP01872 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
IghmP01872 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms