Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.03□□□□□ -0.16
Cfdp1O88271 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfdp1O88271 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cfdp1O88271 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cfdp1O88271 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Cfdp1O88271 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfdp1O88271 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cfdp1O88271 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
Cfdp1O88271 Gm14270-201ENSMUST00000118388 846 ntBASIC14.02□□□□□ -0.17
Cfdp1O88271 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.02□□□□□ -0.17
Cfdp1O88271 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.02□□□□□ -0.17
Cfdp1O88271 Gm3793-201ENSMUST00000204973 672 ntBASIC14.02□□□□□ -0.17
Cfdp1O88271 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.02□□□□□ -0.17
Cfdp1O88271 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.02□□□□□ -0.17
Cfdp1O88271 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cfdp1O88271 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cfdp1O88271 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cfdp1O88271 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.01□□□□□ -0.17
Cfdp1O88271 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.01□□□□□ -0.17
Cfdp1O88271 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.01□□□□□ -0.17
Cfdp1O88271 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.01□□□□□ -0.17
Cfdp1O88271 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Gm10020-201ENSMUST00000081993 612 ntBASIC14.01□□□□□ -0.17
Cfdp1O88271 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cfdp1O88271 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfdp1O88271 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cfdp1O88271 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14□□□□□ -0.17
Cfdp1O88271 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cfdp1O88271 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cfdp1O88271 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14□□□□□ -0.17
Cfdp1O88271 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14□□□□□ -0.17
Cfdp1O88271 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC14□□□□□ -0.17
Cfdp1O88271 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14□□□□□ -0.17
Cfdp1O88271 Gm13668-201ENSMUST00000119237 1001 ntBASIC14□□□□□ -0.17
Cfdp1O88271 Gm13284-201ENSMUST00000121020 547 ntBASIC14□□□□□ -0.17
Cfdp1O88271 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cfdp1O88271 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cfdp1O88271 Gm3726-201ENSMUST00000203110 785 ntBASIC14□□□□□ -0.17
Cfdp1O88271 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14□□□□□ -0.17
Cfdp1O88271 Gm3619-201ENSMUST00000219947 775 ntBASIC14□□□□□ -0.17
Cfdp1O88271 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cfdp1O88271 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfdp1O88271 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms