Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Rnf13O54965 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm24255-201ENSMUST00000104481 128 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.19□□□□□ -0.78
Rnf13O54965 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm26361-201ENSMUST00000158868 186 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Rnf13O54965 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.19□□□□□ -0.78
Rnf13O54965 AY036118-201ENSMUST00000200021 923 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Gm44967-201ENSMUST00000207047 631 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm4978-201ENSMUST00000071565 801 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Gm26448-201ENSMUST00000082446 203 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.19□□□□□ -0.78
Rnf13O54965 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.19□□□□□ -0.78
Rnf13O54965 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Rnf13O54965 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf13O54965 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Rnf13O54965 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.18□□□□□ -0.78
Rnf13O54965 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.18□□□□□ -0.78
Rnf13O54965 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mir7677-201ENSMUST00000184226 67 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Gm43822-201ENSMUST00000200285 476 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Gm9353-201ENSMUST00000200472 604 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.18□□□□□ -0.78
Rnf13O54965 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf13O54965 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf13O54965 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms