Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Npc1O35604 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.01□□□□□ -0.65
Npc1O35604 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Gm15549-201ENSMUST00000121595 622 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm3329-201ENSMUST00000159873 556 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm42518-201ENSMUST00000196277 938 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Gm8365-201ENSMUST00000197334 648 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm45856-201ENSMUST00000212752 416 ntBASIC11.01□□□□□ -0.65
Npc1O35604 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Npc1O35604 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.01□□□□□ -0.65
Npc1O35604 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.01□□□□□ -0.65
Npc1O35604 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Npc1O35604 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gm14395-201ENSMUST00000120494 563 ntBASIC11□□□□□ -0.65
Npc1O35604 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11□□□□□ -0.65
Npc1O35604 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11□□□□□ -0.65
Npc1O35604 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11□□□□□ -0.65
Npc1O35604 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11□□□□□ -0.65
Npc1O35604 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11□□□□□ -0.65
Npc1O35604 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gm23105-201ENSMUST00000083719 134 ntBASIC11□□□□□ -0.65
Npc1O35604 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npc1O35604 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Npc1O35604 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.99□□□□□ -0.65
Npc1O35604 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Npc1O35604 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Npc1O35604 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npc1O35604 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Npc1O35604 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms