Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm15626-201ENSMUST00000117478 868 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Kif4-ps-202ENSMUST00000185083 652 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Saa-ps-201ENSMUST00000211148 320 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 AC124356.1-201ENSMUST00000221469 698 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Gm38111-201ENSMUST00000194817 2741 ntBASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Gm43127-201ENSMUST00000195890 2789 ntBASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 AC134860.2-201ENSMUST00000225277 1036 ntBASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 AC141884.2-201ENSMUST00000228811 775 ntBASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Mir341-201ENSMUST00000093593 96 ntBASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.59■□□□□ 0.09
Hfm1D3Z4R1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hfm1D3Z4R1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Gm6939-201ENSMUST00000122029 864 ntBASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Gm42803-201ENSMUST00000201051 451 ntBASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 CU025215.1-201ENSMUST00000222986 603 ntBASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Atf7-201ENSMUST00000096143 390 ntBASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hfm1D3Z4R1 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms