Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm12030-201ENSMUST00000121917 223 ntBASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm25201-201ENSMUST00000083093 170 ntBASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmf1B9EKI3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Gm12791-201ENSMUST00000120788 655 ntBASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Gm9884-201ENSMUST00000194343 1222 ntBASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Gm45120-201ENSMUST00000208880 408 ntBASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmf1B9EKI3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tmf1B9EKI3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm5739-201ENSMUST00000208601 1703 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm14270-201ENSMUST00000118388 846 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Snord55-201ENSMUST00000174939 79 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm3726-201ENSMUST00000203110 785 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm9139-201ENSMUST00000218817 700 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.2■□□□□ 0.02
Tmf1B9EKI3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms