Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm15982-201ENSMUST00000121681 554 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm6606-201ENSMUST00000193613 947 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm23647-201ENSMUST00000175042 109 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Rn5s-201ENSMUST00000177555 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm22109-201ENSMUST00000177995 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm22291-201ENSMUST00000178027 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm23284-201ENSMUST00000178069 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm25018-201ENSMUST00000179081 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm25212-201ENSMUST00000179432 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm26391-201ENSMUST00000179843 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm45085-201ENSMUST00000209100 441 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Gm24089-201ENSMUST00000093696 109 ntBASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn3aA2ASI5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms