Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chaf1aQ9QWF0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chaf1aQ9QWF0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm11298-201ENSMUST00000120503 1799 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm23949-201ENSMUST00000104027 127 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm23596-201ENSMUST00000104304 132 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm3332-201ENSMUST00000189337 928 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm18056-201ENSMUST00000207670 568 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm18061-201ENSMUST00000208350 562 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm18063-201ENSMUST00000208529 568 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm18052-201ENSMUST00000208750 559 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1aQ9QWF0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1aQ9QWF0 Gm11783-201ENSMUST00000119549 885 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 171.5 ms