Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm13315-201ENSMUST00000120376 991 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm13123-201ENSMUST00000122173 492 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm14822-201ENSMUST00000122247 291 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm24513-201ENSMUST00000174964 138 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm2467-201ENSMUST00000182266 1010 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm5896-201ENSMUST00000189662 1024 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm44711-201ENSMUST00000205414 1264 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.94□□□□□ -0.98
Smco4Q9JIS3 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm11801-201ENSMUST00000117807 746 ntBASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm2231-201ENSMUST00000125661 612 ntBASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm18711-201ENSMUST00000199341 750 ntBASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms