Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm12029-201ENSMUST00000120073 832 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm15595-201ENSMUST00000120840 961 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm15881-201ENSMUST00000148792 942 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm22144-201ENSMUST00000157402 102 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm17391-201ENSMUST00000171036 126 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Mir8093-201ENSMUST00000185043 137 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm29499-201ENSMUST00000189151 486 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm28329-201ENSMUST00000191208 689 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm29171-201ENSMUST00000191397 486 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm5982-201ENSMUST00000196234 512 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm28937-201ENSMUST00000185413 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm29400-201ENSMUST00000187208 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm28662-201ENSMUST00000188446 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm28251-201ENSMUST00000188835 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm37318-201ENSMUST00000194325 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm38017-201ENSMUST00000194768 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm37287-201ENSMUST00000195449 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm37793-201ENSMUST00000195548 695 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Tubb3Q9ERD7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.21□□□□□ -0.62
Tubb3Q9ERD7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms