Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Gm23045-201ENSMUST00000175041 96 ntBASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp4bQ9D8B3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm13045-201ENSMUST00000119019 712 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm22144-201ENSMUST00000157402 102 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Spcs1-203ENSMUST00000226374 592 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Gm5451-201ENSMUST00000080545 579 ntBASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp4bQ9D8B3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp4bQ9D8B3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm11836-201ENSMUST00000121022 441 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Mir7686-201ENSMUST00000200604 57 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms