Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm10169-201ENSMUST00000121822 348 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm38210-201ENSMUST00000191944 809 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm12030-201ENSMUST00000121917 223 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm28324-201ENSMUST00000187913 264 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.79□□□□□ -0.04
U2af1Q9D883 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.79□□□□□ -0.04
U2af1Q9D883 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
U2af1Q9D883 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
U2af1Q9D883 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm12463-201ENSMUST00000118271 849 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.78□□□□□ -0.04
U2af1Q9D883 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm8492-201ENSMUST00000182375 987 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm37028-201ENSMUST00000194276 107 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
U2af1Q9D883 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.78□□□□□ -0.04
U2af1Q9D883 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
U2af1Q9D883 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
U2af1Q9D883 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms