Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm13297-201ENSMUST00000120205 934 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm3329-201ENSMUST00000159873 556 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm17917-201ENSMUST00000218561 953 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm6023-201ENSMUST00000118217 606 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm38188-201ENSMUST00000192879 856 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim42Q9D2H5 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm14127-201ENSMUST00000117906 678 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm13333-201ENSMUST00000119424 781 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms