Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm23694-201ENSMUST00000179335 110 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpa3Q9CQ71 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm23272-201ENSMUST00000104053 129 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm25148-201ENSMUST00000104611 123 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm15374-201ENSMUST00000119313 844 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Mir8115-201ENSMUST00000184992 119 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm43916-201ENSMUST00000205062 967 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Gm23105-201ENSMUST00000083719 134 ntBASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rpa3Q9CQ71 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms