Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Rims2-204ENSMUST00000226410 3685 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm22323-201ENSMUST00000103832 109 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm5616-201ENSMUST00000165252 384 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm8741-201ENSMUST00000174736 384 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm25890-201ENSMUST00000177643 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm25700-201ENSMUST00000177693 110 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm22614-201ENSMUST00000178300 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Mir7677-201ENSMUST00000184226 67 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm37259-201ENSMUST00000193903 849 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm5982-201ENSMUST00000196234 512 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm6450-201ENSMUST00000200896 574 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm22042-201ENSMUST00000082989 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm26110-201ENSMUST00000083971 165 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms