Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm23129-201ENSMUST00000104259 132 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm24470-201ENSMUST00000104486 132 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm8482-201ENSMUST00000117972 471 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm13841-201ENSMUST00000118829 483 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm11449-201ENSMUST00000119175 476 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm26208-201ENSMUST00000158677 124 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm8210-201ENSMUST00000178557 483 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm15454-201ENSMUST00000179718 483 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm22616-201ENSMUST00000179783 100 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm6344-201ENSMUST00000075962 483 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm38227-201ENSMUST00000193036 1602 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm13792-201ENSMUST00000121350 423 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm5845-201ENSMUST00000195812 796 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm6008-201ENSMUST00000206542 874 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm5194-201ENSMUST00000221457 742 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Gm5191-201ENSMUST00000222882 1236 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdh15Q99PJ1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Mir705-201ENSMUST00000102058 82 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Gm13898-201ENSMUST00000141865 610 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh15Q99PJ1 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm4925-202ENSMUST00000168843 1561 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 330 ms