Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm45527-201ENSMUST00000211052 774 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm6478-201ENSMUST00000099450 742 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm12418-201ENSMUST00000118116 942 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm14113-201ENSMUST00000121399 976 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm7627-201ENSMUST00000183205 999 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm27440-201ENSMUST00000184785 107 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clp1Q99LI9 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.94□□□□□ -0.5
Clp1Q99LI9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clp1Q99LI9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms