Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cstf3Q99LI7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm7851-201ENSMUST00000117574 323 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm14277-201ENSMUST00000121195 360 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm22846-201ENSMUST00000157706 270 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm12407-201ENSMUST00000180219 324 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm27552-201ENSMUST00000183351 62 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm27844-201ENSMUST00000183613 62 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm9353-201ENSMUST00000200472 604 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm8342-201ENSMUST00000209839 757 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ntng1-201ENSMUST00000051253 327 ntBASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cstf3Q99LI7 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm14058-201ENSMUST00000116082 735 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm11941-201ENSMUST00000119904 610 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm15566-201ENSMUST00000121130 590 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm11450-201ENSMUST00000121144 333 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm2383-201ENSMUST00000181461 807 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Gm42867-201ENSMUST00000202995 469 ntBASIC10.9□□□□□ -0.66
Cstf3Q99LI7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cstf3Q99LI7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms