Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm37246-201ENSMUST00000192665 835 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Spcs1-203ENSMUST00000226374 592 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm13916-201ENSMUST00000117368 628 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm9062-201ENSMUST00000117712 727 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm11700-201ENSMUST00000119409 403 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm11783-201ENSMUST00000119549 885 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Mir6979-201ENSMUST00000183927 56 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm43138-201ENSMUST00000199123 708 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp11Q99K46 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.88□□□□□ -0.51
Usp11Q99K46 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp11Q99K46 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Usp11Q99K46 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm12165-201ENSMUST00000117047 342 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm12579-201ENSMUST00000118040 783 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm13045-201ENSMUST00000119019 712 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.87□□□□□ -0.51
Usp11Q99K46 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Mir8093-201ENSMUST00000185043 137 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms