Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Gm24074-201ENSMUST00000158178 260 ntBASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Gm37458-201ENSMUST00000194055 410 ntBASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhb6Q91XZ4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm14942-201ENSMUST00000119642 336 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm20426-201ENSMUST00000173657 440 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm43378-201ENSMUST00000199336 582 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhb6Q91XZ4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhb6Q91XZ4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms