Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm6426-201ENSMUST00000209048 854 ntBASIC13.07□□□□□ -0.32
StrcQ8VIM6 Gm45363-201ENSMUST00000210196 1294 ntBASIC13.07□□□□□ -0.32
StrcQ8VIM6 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
StrcQ8VIM6 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Gm7790-201ENSMUST00000118716 1310 ntBASIC13.07□□□□□ -0.32
StrcQ8VIM6 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.07□□□□□ -0.32
StrcQ8VIM6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
StrcQ8VIM6 Mir705-201ENSMUST00000102058 82 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Trav9n-1-201ENSMUST00000185224 339 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm29487-201ENSMUST00000190146 256 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm2021-201ENSMUST00000190623 464 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm37486-201ENSMUST00000195663 405 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm30652-201ENSMUST00000199103 430 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm19798-201ENSMUST00000201502 457 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm3635-201ENSMUST00000212314 354 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm8960-201ENSMUST00000219787 788 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 AC132881.1-201ENSMUST00000223780 1062 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 AC158777.1-201ENSMUST00000226216 1724 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Gm5845-201ENSMUST00000195812 796 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 CT571271.1-201ENSMUST00000227071 670 ntBASIC13.06□□□□□ -0.32
StrcQ8VIM6 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
StrcQ8VIM6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm5046-201ENSMUST00000100608 611 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm24981-201ENSMUST00000104459 132 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm13215-201ENSMUST00000117559 472 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm18621-201ENSMUST00000222677 679 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gm4925-202ENSMUST00000168843 1561 ntBASIC13.05□□□□□ -0.32
StrcQ8VIM6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
StrcQ8VIM6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm13002-201ENSMUST00000119286 682 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm16210-201ENSMUST00000122161 610 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms