Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.65□□□□□ -0.54
Trim60Q8VI40 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim60Q8VI40 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim60Q8VI40 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim60Q8VI40 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.65□□□□□ -0.55
Trim60Q8VI40 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Trim60Q8VI40 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim60Q8VI40 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm24891-201ENSMUST00000104391 136 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm15236-201ENSMUST00000117309 379 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm12501-201ENSMUST00000119163 529 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm26083-201ENSMUST00000157904 193 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm21811-201ENSMUST00000096485 930 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms